Negative cofitness for PP_4008 from Pseudomonas putida KT2440

ATP-dependent serine protease
SEED: ATP-dependent Clp protease ATP-binding subunit ClpA
KEGG: ATP-dependent Clp protease ATP-binding subunit ClpA

Computing cofitness values with 989 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PP_4246		Periplasmic binding protein	-0.36
2	PP_0362		Biotin synthase	-0.30
3	PP_0364		pimeloyl-[acp] methyl ester esterase	-0.30
4	PP_4924		Serine protease, subtilase family	-0.30
5	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	-0.30
6	PP_0365		Malonyl-[acyl-carrier protein] O-methyltransferase	-0.30
7	PP_0049		conserved protein of unknown function	-0.29
8	PP_4984		Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	-0.29
9	PP_4841		putative Urea ABC transporter, periplasmic protein	-0.28
10	PP_5136		ABC transporter, permease protein	-0.28
11	PP_0570		lipoprotein of unknown function	-0.28
12	PP_1792		Glycosyl transferase, group 2 family protein	-0.28
13	PP_1656		ATP:GTP 3'-pyrophosphotransferase	-0.28
14	PP_0363		8-amino-7-oxononanoate synthase	-0.28
15	PP_1072		Leucine-rich repeat domain protein	-0.27
16	PP_4243		non-ribosomal peptide synthase (subunit of ferribactin synthase)	-0.27
17	PP_5603		putative FAD dependent oxidoreductase	-0.26
18	PP_4974		NhaP-type Na+/H+ and K+/H+ antiporters	-0.26
19	PP_1795		conserved protein of unknown function	-0.26
20	PP_3419		Sigma-54 dependent transcriptional regulator/response regulator	-0.25

Or look for positive cofitness