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  • Negative cofitness for PP_4002 from Pseudomonas putida KT2440

    DNA-dependent ATPase required for recombination
    SEED: FIG065221: Holliday junction DNA helicase
    KEGG: putative ATPase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.33
    2 PP_1627 conserved protein of unknown function -0.32
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.29
    4 PP_0540 conserved inner membrane protein -0.28
    5 PP_3627 conserved protein of unknown function -0.28
    6 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.27
    7 PP_1871 Protease HtpX -0.26
    8 PP_1663 conserved exported protein of unknown function -0.26
    9 PP_1797 HlyD family secretion protein -0.26
    10 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.25
    11 PP_1774 conserved exported protein of unknown function -0.25
    12 PP_4495 aromatic amino acid transport protein -0.25
    13 PP_1803 UDP-sugar epimerase -0.25
    14 PP_1075 glycerol kinase -0.25
    15 PP_1791 putative Aldolase/synthase -0.24
    16 PP_5284 UPF0758 protein PP_5284 -0.24
    17 PP_5283 periplasmic dipeptide transport protein -0.24
    18 PP_1800 Oxidoreductase Rmd -0.23
    19 PP_1790 putative Acylneuraminate cytidylyltransferase -0.23
    20 PP_1777 phosphomannomutase -0.23

    Or look for positive cofitness