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  • Negative cofitness for PP_3855 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: conserved hypothetical protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2210 LysR family transcriptional regulator -0.28
    2 PP_1909 putative septum formation protein -0.22
    3 PP_1623 RNA polymerase, sigma S (sigma 38) factor -0.21
    4 PP_2545 trans-aconitate methyltransferase -0.20
    5 PP_2130 putative Soluble lytic transglycosylase -0.20
    6 PP_0355 Response regulator -0.20
    7 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex -0.20
    8 PP_5337 LysR family transcriptional regulator -0.19
    9 PP_3073 3-hydroxybutyrate dehydrogenase -0.19
    10 PP_3744 transcriptional dual regulator GlcC-Glycolate -0.18
    11 PP_3969 Response regulator -0.18
    12 PP_3581 conserved membrane protein of unknown function -0.18
    13 PP_0137 glutamate/aspartate-proton DAACS transporter -0.18
    14 PP_4177 conserved protein of unknown function -0.18
    15 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB -0.18
    16 PP_3907 conserved protein of unknown function -0.18
    17 PP_0134 conserved exported protein of unknown function -0.18
    18 PP_0969 Transcriptional regulator, GntR family -0.18
    19 PP_3104 conserved protein of unknown function -0.18
    20 PP_3761 Sensor histidine kinase/response regulator -0.18

    Or look for positive cofitness