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  • Negative cofitness for PP_3852 from Pseudomonas putida KT2440

    conserved protein of unknown function with BNR domain
    SEED: Sialidase (EC 3.2.1.18)

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2326 Universal stress protein -0.19
    2 PP_4221 non-ribosomal peptide synthetase (subunit of ferribactin synthase) -0.18
    3 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator -0.17
    4 PP_4954 conserved membrane protein of unknown function -0.16
    5 PP_3733 putative ABC transporter lipoprotein -0.16
    6 PP_0248 Probable alpha-L-glutamate ligase -0.16
    7 PP_4922 Phosphomethylpyrimidine synthase -0.16
    8 PP_0244 conserved protein of unknown function -0.16
    9 PP_0356 malate synthase G -0.16
    10 PP_0980 Probable cytosol aminopeptidase -0.15
    11 PP_3814 Polyamine ABC transporter, periplasmic polyamine-binding protein -0.15
    12 PP_3949 HTH-type transcriptional repressor NicS -0.15
    13 PP_3406 Acetyltransferase, GNAT family -0.14
    14 PP_2376 Esterified fatty acid cis/trans isomerase -0.14
    15 PP_1309 conserved exported protein of unknown function -0.14
    16 PP_1301 quality control serine endoprotease DegS -0.14
    17 PP_0581 3-oxoacyl-(Acyl-carrier-protein) reductase -0.14
    18 PP_1042 Type II secretion system protein K -0.14
    19 PP_1743 acetate permease -0.14
    20 PP_1242 conserved protein of unknown function -0.14

    Or look for positive cofitness