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  • Negative cofitness for PP_3847 from Pseudomonas putida KT2440

    Transcriptional regulator, LuxR family
    SEED: transcriptional regulator, LuxR family

    Computing cofitness values with 995 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3931 putative transporter -0.18
    2 PP_3376 putative phosphonate dehydrogenase -0.18
    3 PP_3190 Ornithine cyclodeaminase/mu-crystallin family protein -0.18
    4 PP_2652 putative Hydratase/decarboxylase -0.17
    5 PP_0614 putative N-carbamoyl-beta-alanine amidohydrolase/allantoine amidohydrolase 1 -0.17
    6 PP_5064 choline dehydrogenase -0.17
    7 PP_3563 conserved exported protein of unknown function -0.17
    8 PP_2348 Sensor histidine kinase -0.16
    9 PP_2893 conserved exported protein of unknown function -0.16
    10 PP_2732 conserved protein of unknown function -0.16
    11 PP_2349 nitrite transporter, HPP family (from data) -0.16
    12 PP_3405 conserved membrane protein of unknown function -0.16
    13 PP_5170 sulfate ABC transporter, inner membrane subunit CysT -0.16
    14 PP_3095 Protein ClpV1 -0.16
    15 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator -0.16
    16 PP_1488 Methyl-accepting chemotaxis transducer -0.15
    17 PP_2365 Transcriptional regulator, AraC family -0.15
    18 PP_4576 allophanate hydrolase subunit -0.15
    19 PP_1709 Fumarylacetoacetate hydrolase family protein -0.15
    20 PP_3939 porin-like protein -0.15

    Or look for positive cofitness