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  • Negative cofitness for PP_3834 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Circadian clock protein KaiC
    KEGG: circadian clock protein KaiC

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4246 Periplasmic binding protein -0.28
    2 PP_0574 DNA-binding response regulator, LuxR family -0.27
    3 PP_4100 Transcriptional regulator, Cro/CI family -0.23
    4 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate -0.21
    5 PP_4221 non-ribosomal peptide synthetase (subunit of ferribactin synthase) -0.20
    6 PP_1875 Sensor histidine kinase/response regulator -0.19
    7 PP_0353 Exonuclease -0.19
    8 PP_0889 conserved exported protein of unknown function -0.18
    9 PP_4999 dihydroorotase-like protein -0.18
    10 PP_5262 Probable multidrug resistance protein NorM -0.17
    11 PP_3831 conserved protein of unknown function -0.17
    12 PP_0803 Protein secretion ABC efflux system, membrane fusion protein -0.17
    13 PP_4531 conserved exported protein of unknown function -0.17
    14 PP_4412 conserved protein of unknown function -0.17
    15 PP_4300 putative hydroxypyruvate reductase -0.17
    16 PP_0348 conserved protein of unknown function -0.17
    17 PP_0573 conserved protein of unknown function -0.16
    18 PP_4346 D-alanine--D-alanine ligase A -0.16
    19 PP_1301 quality control serine endoprotease DegS -0.16
    20 PP_3244 Magnesium transporter, MgtC family -0.16

    Or look for positive cofitness