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  • Negative cofitness for PP_3768 from Pseudomonas putida KT2440

    putative shikimate 5-dehydrogenase
    SEED: Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1786 putative Glycosyl transferase -0.41
    2 PP_1795 conserved protein of unknown function -0.34
    3 PP_4939 conserved protein of unknown function -0.32
    4 PP_1793 Glycosyl transferase, group 2 family protein -0.32
    5 PP_0439 conserved protein of unknown function -0.32
    6 PP_1320 stringent starvation protein A -0.31
    7 PP_4978 conserved protein of unknown function -0.28
    8 PP_1370 Glycosyl transferase, group 1 family protein -0.27
    9 PP_3957 choline/carnitine/betaine transporter BetTC -0.27
    10 PP_4859 Transcriptional regulator, TetR family -0.25
    11 PP_0190 putative disulfide bond formation protein B -0.25
    12 PP_0498 conserved protein of unknown function -0.25
    13 PP_4675 methionine sulfoxide reductase heme-binding subunit -0.24
    14 PP_0624 Uncharacterized protein YfiH -0.24
    15 PP_4940 Putative glycosyltransferase -0.24
    16 PP_1191 S4 domain protein -0.23
    17 PP_2257 putative aerotaxis receptor -0.23
    18 PP_5064 choline dehydrogenase -0.23
    19 PP_0345 putative Heptose kinase WapP -0.23
    20 PP_0963 putative BolA family protein -0.23

    Or look for positive cofitness