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  • Negative cofitness for PP_3736 from Pseudomonas putida KT2440

    vanillate O-demethylase oxygenase subunit
    SEED: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
    KEGG: vanillate monooxygenase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3739 porin-like protein -0.39
    2 PP_3651 Sensor histidine kinase/response regulator -0.23
    3 PP_5053 Protein-export protein SecB -0.22
    4 PP_3740 Major facilitator family transporter -0.22
    5 PP_2387 conserved protein of unknown function -0.18
    6 PP_2458 ribokinase -0.16
    7 PP_5200 proline aminopeptidase P II -0.16
    8 PP_4118 putative Membrane protein -0.15
    9 PP_3546 Sensory box histidine kinase/response regulator -0.15
    10 PP_4940 Putative glycosyltransferase -0.15
    11 PP_1664 phosphoribosylglycinamide formyltransferase 1 -0.15
    12 PP_4551 Hydrolase, alpha/beta fold family -0.14
    13 PP_3160 conserved protein of unknown function -0.13
    14 PP_1139 branched chain amino acid transporter - permease subunit -0.13
    15 PP_1140 branched chain amino acid transporter - permease subunit -0.13
    16 PP_4936 O-antigen polymerase -0.13
    17 PP_5433 putative NADH:ubiquinone oxidoreductase subunit 2 -0.13
    18 PP_4398 Major facilitator family transporter -0.12
    19 PP_4096 conserved exported protein of unknown function -0.12
    20 PP_3741 transpeptidase (penicillin-binding protein 2) -0.12

    Or look for positive cofitness