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  • Negative cofitness for PP_3603 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Predicted D-glucarate or D-galactorate regulator, GntR family
    KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1803 UDP-sugar epimerase -0.21
    2 PP_1798 Outer membrane efflux protein -0.21
    3 PP_5284 UPF0758 protein PP_5284 -0.20
    4 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase -0.20
    5 PP_1777 phosphomannomutase -0.20
    6 PP_1799 GDP-mannose 4,6-dehydratase -0.20
    7 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB -0.19
    8 PP_1279 Probable alginate O-acetylase AlgJ -0.19
    9 PP_0885 dipeptide ABC transporter - periplasmic binding protein -0.19
    10 PP_3627 conserved protein of unknown function -0.19
    11 PP_1797 HlyD family secretion protein -0.18
    12 PP_1627 conserved protein of unknown function -0.18
    13 PP_5283 periplasmic dipeptide transport protein -0.18
    14 PP_0540 conserved inner membrane protein -0.18
    15 PP_5433 putative NADH:ubiquinone oxidoreductase subunit 2 -0.18
    16 PP_1800 Oxidoreductase Rmd -0.18
    17 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.18
    18 PP_1805 Polysaccharide biosynthesis protein -0.18
    19 PP_4762 Acyl-CoA thioesterase II -0.17
    20 PP_1523 conserved protein of unknown function -0.17

    Or look for positive cofitness