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  • Negative cofitness for PP_3596 from Pseudomonas putida KT2440

    D-lysine oxidase
    SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
    KEGG: D-amino-acid dehydrogenase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1792 Glycosyl transferase, group 2 family protein -0.22
    2 PP_4480 arginine N-succinyltransferase, subunit alpha -0.21
    3 PP_3731 Transcriptional regulator, TetR family -0.21
    4 PP_3789 putative Efflux transporter -0.16
    5 PP_3732 Enoyl-CoA hydratase/isomerase family protein -0.16
    6 PP_4295 TetR family transcriptional regulator -0.16
    7 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase -0.15
    8 PP_3790 diaminopimelate epimerase -0.14
    9 PP_5360 conserved protein of unknown function -0.14
    10 PP_2248 putative transporter -0.14
    11 PP_1893 medium-long chain acyl-CoA dehydrogenase -0.14
    12 PP_2388 Transporter, LysE family -0.14
    13 PP_5219 conserved membrane protein of unknown function -0.14
    14 PP_0659 Cystathionine gamma-synthase -0.14
    15 PP_4246 Periplasmic binding protein -0.14
    16 PP_4405 Sensory box protein -0.13
    17 PP_1574 conserved protein of unknown function -0.13
    18 PP_4446 putative Group II intron-encoding maturase -0.13
    19 PP_2685 conserved protein of unknown function -0.13
    20 PP_1793 Glycosyl transferase, group 2 family protein -0.13

    Or look for positive cofitness