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  • Negative cofitness for PP_3577 from Pseudomonas putida KT2440

    RNA polymerase, sigma 19 factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2537 conserved protein of unknown function -0.20
    2 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.18
    3 PP_4897 N-acetylmuramoyl-L-alanine amidase -0.18
    4 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase -0.18
    5 PP_0506 putative ABC efflux transporter, permease protein -0.17
    6 PP_4684 conserved protein of unknown function with kinase-like domain -0.16
    7 PP_3949 HTH-type transcriptional repressor NicS -0.16
    8 PP_2645 magnesium transporter, ATP-dependent -0.16
    9 PP_2646 conserved protein of unknown function -0.16
    10 PP_0270 Sensor histidine kinase -0.15
    11 PP_3790 diaminopimelate epimerase -0.15
    12 PP_1581 BNR domain protein -0.15
    13 PP_1730 Probable M18 family aminopeptidase 2 -0.15
    14 PP_2506 conserved membrane protein of unknown function -0.15
    15 PP_3788 putative Non-ribosomal peptide synthetase -0.14
    16 PP_1579 conserved protein of unknown function -0.13
    17 PP_2267 putative Phage single-stranded DNA-binding protein -0.13
    18 PP_3206 conserved protein of unknown function -0.13
    19 PP_3245 conserved protein of unknown function -0.13
    20 PP_3425 Efflux transporter RND family, MFP subunit -0.13

    Or look for positive cofitness