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  • Negative cofitness for PP_3571 from Pseudomonas putida KT2440

    putative Acetylornithine deacetylase
    SEED: N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)
    KEGG: acetylornithine deacetylase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2971 transposase -0.20
    2 PP_5449 conserved exported protein of unknown function -0.20
    3 PP_0973 Nucleoid-associated protein PP_0973 -0.19
    4 PP_0218 Sensory box protein -0.19
    5 PP_4331 conserved protein of unknown function -0.19
    6 PP_3549 multidrug efflux transport system - membrane fusion protein -0.18
    7 PP_1718 putative diguanylate phosphodiesterase containing EAL domain -0.18
    8 PP_5041 glycogen phosphorylase -0.18
    9 PP_3415 Transcriptional regulator, LacI family -0.17
    10 PP_4386 flagellar basal-body rod protein FlgF -0.17
    11 PP_2362 putative usher protein -0.17
    12 PP_3719 Putrescine-binding periplasmic protein -0.17
    13 PP_4382 Peptidoglycan hydrolase FlgJ -0.17
    14 PP_0495 type 1 L-asparaginase -0.17
    15 PP_5512 protein of unknown function -0.17
    16 PP_0823 Selenide, water dikinase -0.17
    17 PP_4008 ATP-dependent serine protease -0.17
    18 PP_1623 RNA polymerase, sigma S (sigma 38) factor -0.17
    19 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons -0.17
    20 PP_4388 Flagellar hook protein FlgE -0.16

    Or look for positive cofitness