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  • Negative cofitness for PP_3569 from Pseudomonas putida KT2440

    quinate dehydrogenase (quinone)
    SEED: Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25)
    KEGG: quinate dehydrogenase (quinone)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1301 quality control serine endoprotease DegS -0.25
    2 PP_0506 putative ABC efflux transporter, permease protein -0.22
    3 PP_2714 Sensor histidine kinase -0.20
    4 PP_0507 putative ABC efflux transporter, ATP-binding protein -0.20
    5 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.20
    6 PP_3790 diaminopimelate epimerase -0.18
    7 PP_2348 Sensor histidine kinase -0.18
    8 PP_2057 Uncharacterized transporter YraO -0.17
    9 PP_5484 protein of unknown function -0.17
    10 PP_4922 Phosphomethylpyrimidine synthase -0.17
    11 PP_2751 conserved exported protein of unknown function -0.17
    12 PP_3299 Outer membrane lipoprotein -0.17
    13 PP_2054 putative DNA-binding transcriptional regulator -0.17
    14 PP_0889 conserved exported protein of unknown function -0.17
    15 PP_5200 proline aminopeptidase P II -0.16
    16 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.16
    17 PP_5709 protein of unknown function -0.16
    18 PP_3678 conserved protein of unknown function -0.16
    19 PP_2537 conserved protein of unknown function -0.16
    20 PP_4531 conserved exported protein of unknown function -0.15

    Or look for positive cofitness