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  • Negative cofitness for PP_3436 from Pseudomonas putida KT2440

    chloramphenicol-sensitive protein
    SEED: Protein rarD
    KEGG: chloramphenicol-sensitive protein RarD

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease -0.21
    2 PP_1059 Uncharacterized amino acid permease YtnA -0.20
    3 PP_0331 conserved protein of unknown function -0.18
    4 PP_2543 gamma-aminobutyrate permease -0.18
    5 PP_5279 conserved protein of unknown function -0.17
    6 PP_0227 periplasmic cystine-binding protein -0.17
    7 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.17
    8 PP_5021 Methyl-accepting chemotaxis transducer -0.16
    9 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 -0.16
    10 PP_1798 Outer membrane efflux protein -0.16
    11 PP_3084 putative Outer membrane ferric siderophore receptor -0.16
    12 PP_1204 putative Lipoprotein -0.15
    13 PP_3825 conserved protein of unknown function -0.15
    14 PP_0333 conserved exported protein of unknown function -0.15
    15 PP_5284 UPF0758 protein PP_5284 -0.14
    16 PP_1627 conserved protein of unknown function -0.14
    17 PP_1631 conserved protein of unknown function -0.14
    18 PP_1279 Probable alginate O-acetylase AlgJ -0.14
    19 PP_2948 Transcriptional regulator, GntR family -0.14
    20 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily -0.14

    Or look for positive cofitness