Negative cofitness for PP_3419 from Pseudomonas putida KT2440

Sigma-54 dependent transcriptional regulator/response regulator
SEED: Nitrogen regulation protein NR(I)

Computing cofitness values with 1005 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PP_5502		ribosome modulation factor	-0.30
2	PP_4892		integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex	-0.27
3	PP_4342		flagellar synthesis regulator, putative ATPase	-0.26
4	PP_4008		ATP-dependent serine protease	-0.25
5	PP_2077		diaminopimelate decarboxylase	-0.24
6	PP_4343		Flagellar biosynthesis protein FlhF	-0.24
7	PP_0395		putative type IV piliation protein	-0.24
8	PP_0951		Ribosome hibernation promoting factor	-0.24
9	PP_0397		protein kinase	-0.24
10	PP_1319		Ubiquinol--cytochrome c reductase, cytochrome c1	-0.24
11	PP_1036		membrane-bound lytic murein transglycosylase F	-0.24
12	PP_3415		Transcriptional regulator, LacI family	-0.24
13	PP_1087		Outer membrane protein, OmpA family	-0.23
14	PP_0396		conserved protein of unknown function	-0.23
15	PP_2971		transposase	-0.23
16	PP_5337		LysR family transcriptional regulator	-0.23
17	PP_4941		conserved exported protein of unknown function	-0.22
18	PP_1623		RNA polymerase, sigma S (sigma 38) factor	-0.22
19	PP_3803		putative Cation ABC transporter, permease protein	-0.22
20	PP_2757		putative Sugar-binding protein	-0.21

Or look for positive cofitness