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  • Negative cofitness for PP_3393 from Pseudomonas putida KT2440

    CAIB/BAIF family protein
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0049 conserved protein of unknown function -0.22
    2 PP_4246 Periplasmic binding protein -0.21
    3 PP_1301 quality control serine endoprotease DegS -0.18
    4 PP_1011 glucokinase -0.18
    5 PP_3419 Sigma-54 dependent transcriptional regulator/response regulator -0.18
    6 PP_1030 conserved protein of unknown function -0.18
    7 PP_0303 dehydrocarnitine cleavage enzyme -0.17
    8 PP_0362 Biotin synthase -0.17
    9 PP_4434 D-amino acid dehydrogenase 1 small subunit -0.17
    10 PP_4405 Sensory box protein -0.17
    11 PP_5384 copper sensor protein -0.17
    12 PP_3857 conserved protein of unknown function -0.17
    13 PP_1422 conserved protein of unknown function -0.16
    14 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.16
    15 PP_3417 D-gluconate transporter -0.16
    16 PP_5293 conserved protein of unknown function -0.16
    17 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase -0.16
    18 PP_0818 conserved protein of unknown function -0.16
    19 PP_4911 conserved protein of unknown function -0.15
    20 PP_4922 Phosphomethylpyrimidine synthase -0.15

    Or look for positive cofitness