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  • Negative cofitness for PP_3380 from Pseudomonas putida KT2440

    2-ketogluconate utilization repressor
    SEED: 2-ketogluconate utilization repressor PtxS
    KEGG: LacI family transcriptional regulator, kdg operon repressor

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0020 hypothetical protein -0.17
    2 PP_2181 Transcriptional regulator, Cro/CI family -0.16
    3 PP_5127 ribosomal RNA large subunit methyltransferase I -0.16
    4 PP_2113 Ribosomal RNA large subunit methyltransferase M -0.15
    5 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase -0.13
    6 PP_4198 OmpA family protein -0.13
    7 PP_1021 DNA-binding transcriptional regulator -0.13
    8 PP_2863 conserved membrane protein of unknown function -0.12
    9 PP_0959 phospholipid ABC transporter -0.12
    10 PP_0024 putative membrane-associated metal-dependent hydrolase -0.12
    11 PP_3291 Metallo-beta-lactamase family protein -0.12
    12 PP_0021 conserved hypothetical protein -0.12
    13 PP_0726 Transferase -0.12
    14 PP_2389 conserved protein of unknown function -0.12
    15 PP_0430 conserved protein of unknown function -0.12
    16 PP_3706 conserved protein of unknown function -0.12
    17 PP_2108 conserved protein of unknown function -0.12
    18 PP_4818 ribosomal protein L11 methyltransferase -0.11
    19 PP_5351 glucose-6-phosphate 1-dehydrogenase -0.11
    20 PP_1140 branched chain amino acid transporter - permease subunit -0.11

    Or look for positive cofitness