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  • Negative cofitness for PP_3344 from Pseudomonas putida KT2440

    nickel ABC transporter permease subunit
    SEED: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4429 Transcriptional regulator, GntR family -0.20
    2 PP_3784 conserved protein of unknown function -0.19
    3 PP_3417 D-gluconate transporter -0.19
    4 PP_4458 putative Opine ABC transporter, periplasmic binding protein -0.19
    5 PP_5SB 5S ribosomal RNA -0.19
    6 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase -0.19
    7 PP_4785 conserved exported protein of unknown function -0.19
    8 PP_0570 lipoprotein of unknown function -0.18
    9 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase -0.18
    10 PP_1118 Recombinase-related protein -0.18
    11 PP_2388 Transporter, LysE family -0.18
    12 PP_3695 conserved protein of unknown function -0.18
    13 PP_5623 conserved membrane protein of unknown function -0.18
    14 PP_2654 putative Glutathione S-transferase -0.17
    15 PP_2287 Phage internal core protein -0.17
    16 PP_3783 syringomycin biosynthesis enzyme 2 -0.17
    17 PP_2284 Tail tubular protein B -0.17
    18 PP_0506 putative ABC efflux transporter, permease protein -0.17
    19 PP_2168 Transaldolase -0.17
    20 PP_1303 Sulfate adenylyltransferase subunit 2 -0.17

    Or look for positive cofitness