• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_3341 from Pseudomonas putida KT2440

    nickel-responsive regulator
    SEED: Nickel responsive regulator NikR
    KEGG: CopG family transcriptional regulator, nickel-responsive regulator

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2210 LysR family transcriptional regulator -0.24
    2 PP_3103 conserved protein of unknown function -0.20
    3 PP_3969 Response regulator -0.20
    4 PP_2694 Aldehyde dehydrogenase family protein -0.20
    5 PP_2874 conserved protein of unknown function -0.18
    6 PP_0355 Response regulator -0.18
    7 PP_4100 Transcriptional regulator, Cro/CI family -0.18
    8 PP_3536 conserved protein of unknown function -0.18
    9 PP_5166 Sigma-54 dependent transcriptional regulator -0.17
    10 PP_3414 Methyl-accepting chemotaxis transducer/sensory box protein -0.17
    11 PP_5117 putative hydrolase -0.17
    12 PP_4895 tRNA dimethylallyltransferase -0.17
    13 PP_3088 conserved protein of unknown function -0.16
    14 PP_1112 conserved membrane protein of unknown function -0.16
    15 PP_5378 putative metal-binding protein -0.16
    16 PP_5138 putative transcriptional regulator LysR family -0.16
    17 PP_3705 conserved membrane protein of unknown function -0.16
    18 PP_0691 Glutamate 5-kinase -0.16
    19 PP_2933 GSH-dependent disulfide bond oxidoreductase -0.16
    20 PP_1699 2-pyrone-4,6-dicarboxylic acid hydrolase -0.16

    Or look for positive cofitness