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  • Negative cofitness for PP_3281 from Pseudomonas putida KT2440

    hydroxyphenylacetyl-CoA thioesterase
    SEED: Phenylacetic acid degradation protein PaaD, thioesterase
    KEGG: phenylacetic acid degradation protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4427 Amino acid ABC transporter, permease protein -0.14
    2 PP_3757 Chemotaxis protein CheY -0.13
    3 PP_4500 TrpH family protein -0.13
    4 PP_0914 GGDEF domain protein -0.13
    5 PP_0330 hypothetical protein -0.12
    6 PP_0917 Chromosome initiation inhibitor -0.12
    7 PP_4172 conserved exported protein of unknown function -0.12
    8 PP_0332 putative Acyltransferase -0.11
    9 PP_4724 Carbamoyl-phosphate synthase small chain -0.11
    10 PP_3983 conserved protein of unknown function -0.11
    11 PP_5494 protein of unknown function -0.11
    12 PP_3319 Sensory box protein/GGDEF domain protein -0.11
    13 PP_2414 conserved exported protein of unknown function -0.11
    14 PP_4723 Carbamoyl-phosphate synthase large chain -0.11
    15 PP_3323 CobW/P47K family protein -0.11
    16 PP_2653 Transcriptional regulator, Cro/CI family -0.11
    17 PP_0014 putative transposase -0.11
    18 PP_2258 Sensory box protein -0.11
    19 PP_4413 conserved protein of unknown function -0.11
    20 PP_4627 transcriptional regulator, LysR family -0.11

    Or look for positive cofitness