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  • Negative cofitness for PP_3248 from Pseudomonas putida KT2440

    Dyp-type peroxidase family protein
    SEED: Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup
    KEGG: putative iron-dependent peroxidase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2714 Sensor histidine kinase -0.35
    2 PP_2348 Sensor histidine kinase -0.33
    3 PP_0506 putative ABC efflux transporter, permease protein -0.30
    4 PP_3376 putative phosphonate dehydrogenase -0.28
    5 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily -0.27
    6 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.27
    7 PP_5200 proline aminopeptidase P II -0.25
    8 PP_4882 Iron ABC transporter, permease protein -0.24
    9 PP_1651 two-component response regulator -0.23
    10 PP_1083 (2Fe-2S)-binding protein -0.23
    11 PP_0889 conserved exported protein of unknown function -0.23
    12 PP_4060 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase -0.23
    13 PP_2528 O-acetylhomoserine (thiol)-lyase -0.21
    14 PP_3797 conserved membrane protein of unknown function -0.21
    15 PP_3801 putative Cation ABC transporter, periplasmic cation-binding protein -0.21
    16 PP_0893 ThiJ/PfpI family protein -0.20
    17 PP_2916 riboflavin synthase -0.20
    18 PP_1301 quality control serine endoprotease DegS -0.20
    19 PP_3453 putative Sensor protein RstB -0.19
    20 PP_3664 CDP-diacylglycerol--serine O-phosphatidyltransferase -0.19

    Or look for positive cofitness