• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_3213 from Pseudomonas putida KT2440

    ABC transporter, periplasmic binding component-related protein
    SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3052 conserved protein of unknown function -0.15
    2 PP_1135 conserved exported protein of unknown function -0.14
    3 PP_4968 DNA ligase B -0.13
    4 PP_3061 conserved protein of unknown function -0.13
    5 PP_2398 conserved protein of unknown function, UPF0276 family -0.12
    6 PP_4256 cytochrome c oxidase subunit, cbb3-type -0.12
    7 PP_2343 conserved protein of unknown function -0.12
    8 PP_0051 putative sigma-54 dependent transcriptional regulator -0.11
    9 PP_3983 conserved protein of unknown function -0.11
    10 PP_3768 putative shikimate 5-dehydrogenase -0.11
    11 PP_4293 conserved exported protein of unknown function -0.11
    12 PP_4308 Transcriptional regulator, AsnC family -0.11
    13 PP_0580 MaoC domain protein -0.11
    14 PP_1700 Acyltransferase -0.11
    15 PP_0929 putative Lipoprotein -0.11
    16 PP_2842 urease accessory protein -0.11
    17 PP_3407 conserved protein of unknown function -0.11
    18 PP_2887 Catalase-related peroxidase -0.11
    19 PP_1448 conserved membrane protein of unknown function -0.11
    20 PP_0661 putative Transcriptional regulator AmpR -0.10

    Or look for positive cofitness