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  • Negative cofitness for PP_3166 from Pseudomonas putida KT2440

    catechol 1,2-dioxygenase
    SEED: Catechol 1,2-dioxygenase (EC 1.13.11.1)
    KEGG: catechol 1,2-dioxygenase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2276 putative phage exonuclease -0.20
    2 PP_4330 putative toxin-related protein -0.20
    3 PP_3725 putative Acyl-CoA dehydrogenase -0.20
    4 PP_0893 ThiJ/PfpI family protein -0.19
    5 PP_1301 quality control serine endoprotease DegS -0.19
    6 PP_3977 conserved protein of unknown function -0.18
    7 PP_5060 conserved protein of unknown function -0.18
    8 PP_0873 putrescine-binding periplasmic protein -0.18
    9 PP_0331 conserved protein of unknown function -0.18
    10 PP_4974 NhaP-type Na+/H+ and K+/H+ antiporters -0.18
    11 PP_0298 AraC-family transcriptional regulator -0.18
    12 PP_2758 putative Ribose ABC transporter, periplasmic ribose-binding protein -0.17
    13 PP_4109 conserved protein of unknown function -0.17
    14 PP_0539 glucose-regulated peptidase -0.17
    15 PP_3244 Magnesium transporter, MgtC family -0.17
    16 PP_1109 Transcriptional regulator, GntR family -0.17
    17 PP_3581 conserved membrane protein of unknown function -0.17
    18 PP_3176 Major facilitator family transporter -0.16
    19 PP_2306 conserved exported protein of unknown function -0.16
    20 PP_3546 Sensory box histidine kinase/response regulator -0.16

    Or look for positive cofitness