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  • Negative cofitness for PP_3161 from Pseudomonas putida KT2440

    benzoate 1,2-dioxygenase subunit alpha
    SEED: Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
    KEGG: benzoate 1,2-dioxygenase alpha subunit

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3733 putative ABC transporter lipoprotein -0.12
    2 PP_2035 benzoate transport protein -0.11
    3 PP_5433 putative NADH:ubiquinone oxidoreductase subunit 2 -0.11
    4 PP_0099 conserved protein of unknown function -0.10
    5 PP_3730 Transcriptional regulatory protein AruR -0.10
    6 PP_0578 putative Methyltransferase -0.10
    7 PP_2412 ParA family protein -0.10
    8 PP_1987 Methlytransferase, UbiE/COQ5 family -0.10
    9 PP_0617 Branched-chain amino acid ABC transporter, permease protein -0.09
    10 PP_2152 glycerophosphoryl diester phosphodiesterase -0.09
    11 PP_2866 FMN-dependent NADH-azoreductase 1 -0.09
    12 PP_3398 putative Curli fiber surface-exposed nucleator CsgB -0.09
    13 PP_2017 aminopeptidase N -0.09
    14 PP_4160 K+ transporting ATPase, KdpB subunit -0.09
    15 PP_5444 protein of unknown function -0.09
    16 PP_2259 putative sigma-54 dependent transcriptional regulator -0.09
    17 PP_4959 diguanylate cyclase -0.09
    18 PP_3761 Sensor histidine kinase/response regulator -0.09
    19 PP_0185 Positive alginate biosynthesis regulatory protein -0.08
    20 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 -0.08

    Or look for positive cofitness