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  • Negative cofitness for PP_3090 from Pseudomonas putida KT2440

    OmpA domain protein
    SEED: OmpA domain protein
    KEGG: type VI secretion system protein ImpL

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3680 conserved protein of unknown function -0.28
    2 PP_1937 putative helicase -0.25
    3 PP_1940 Methyl-accepting chemotaxis transducer -0.23
    4 PP_1792 Glycosyl transferase, group 2 family protein -0.21
    5 PP_1954 conserved protein of unknown function -0.21
    6 PP_3681 putative Helicase -0.20
    7 PP_5741 conserved protein of unknown function -0.20
    8 PP_1793 Glycosyl transferase, group 2 family protein -0.20
    9 PP_1952 Metallo-beta-lactamase family protein -0.20
    10 PP_1945 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -0.20
    11 PP_0160 putative ferrioxamine receptor -0.20
    12 PP_4458 putative Opine ABC transporter, periplasmic binding protein -0.19
    13 PP_1794 conserved hypothetical protein -0.19
    14 PP_4434 D-amino acid dehydrogenase 1 small subunit -0.19
    15 PP_1949 Oxidoreductase, GMC family -0.19
    16 PP_1795 conserved protein of unknown function -0.19
    17 PP_3697 conserved protein of unknown function -0.18
    18 PP_3845 putrescine-binding periplasmic protein -0.18
    19 PP_1957 Oxidoreductase, Pdr/VanB family -0.17
    20 PP_1958 conserved protein of unknown function -0.17

    Or look for positive cofitness