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  • Negative cofitness for PP_3089 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Putative cytoplasmic protein USSDB7A
    KEGG: type VI secretion system secreted protein Hcp

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3681 putative Helicase -0.21
    2 PP_4455 glutathione ABC transporter permease subunit -0.20
    3 PP_3680 conserved protein of unknown function -0.19
    4 PP_5406 transposase -0.17
    5 PP_2287 Phage internal core protein -0.17
    6 PP_1937 putative helicase -0.17
    7 PP_2288 Phage tail fiber protein -0.16
    8 PP_2964 putative transposase -0.16
    9 PP_2276 putative phage exonuclease -0.16
    10 PP_2356 putative Phytochrome family protein -0.15
    11 PP_1942 Transcriptional regulator, LysR family -0.15
    12 PP_1936 conserved membrane protein of unknown function -0.15
    13 PP_3383 gluconate 2-dehydrogenase flavoprotein subunit -0.14
    14 PP_0539 glucose-regulated peptidase -0.14
    15 PP_5361 47 kDa protein -0.14
    16 PP_0960 phospholipid ABC transporter binding protein -0.14
    17 PP_5403 conserved protein of unknown function -0.14
    18 PP_1943 formyltetrahydrofolate deformylase -0.14
    19 PP_0298 AraC-family transcriptional regulator -0.13
    20 PP_4421 putative aminotransferase -0.13

    Or look for positive cofitness