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  • Negative cofitness for PP_3065 from Pseudomonas putida KT2440

    Pyocin R2_PP, tail formation
    SEED: FIG032563: Phage tail protein D

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4176 putative 5-oxo-L-prolinase -0.26
    2 PP_2210 LysR family transcriptional regulator -0.25
    3 PP_2757 putative Sugar-binding protein -0.25
    4 PP_2805 FAD-containing monooxygenase EthA -0.24
    5 PP_4918 conserved protein of unknown function -0.23
    6 PP_0051 putative sigma-54 dependent transcriptional regulator -0.23
    7 PP_0882 dipeptide ABC transporter - periplasmic binding protein -0.22
    8 PP_1824 Smr domain protein -0.22
    9 PP_0663 Transcriptional regulator, AsnC family -0.21
    10 PP_1742 conserved inner membrane protein of unknown function -0.21
    11 PP_0245 putative transcriptional accessory protein -0.20
    12 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat -0.20
    13 PP_4542 putative ABC transporter, ATP-binding protein/permease protein -0.20
    14 PP_0534 putative Transcriptional regulator PfeR -0.19
    15 PP_2483 conserved protein of unknown function -0.19
    16 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex -0.19
    17 PP_0355 Response regulator -0.19
    18 PP_2505 GAF domain/GGDEF domain protein -0.19
    19 PP_1907 Hydrolase, haloacid dehalogenase-like family -0.18
    20 PP_5157 conserved exported protein of unknown function -0.18

    Or look for positive cofitness