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  • Negative cofitness for PP_3040 from Pseudomonas putida KT2440

    Pyocin R2_PP, holin
    SEED: Holin

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5279 conserved protein of unknown function -0.19
    2 PP_3884 Phage holin, lambda family -0.18
    3 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.18
    4 PP_2948 Transcriptional regulator, GntR family -0.17
    5 PP_3518 conserved exported protein of unknown function -0.17
    6 PP_0534 putative Transcriptional regulator PfeR -0.17
    7 PP_5144 conserved protein of unknown function -0.17
    8 PP_1627 conserved protein of unknown function -0.16
    9 PP_0883 glycine-glutamate dipeptide porin -0.16
    10 PP_0069 putative Rossmann fold nucleotide-binding protein -0.16
    11 PP_3481 conserved exported protein of unknown function -0.16
    12 PP_3727 Amino-acid permease RocE -0.16
    13 PP_4176 putative 5-oxo-L-prolinase -0.15
    14 PP_1440 tRNA (mo5U34)-methyltransferase -0.15
    15 PP_3088 conserved protein of unknown function -0.15
    16 PP_0578 putative Methyltransferase -0.15
    17 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase -0.15
    18 PP_t49 tRNA-Met -0.14
    19 PP_0866 putative Transmembrane sensor -0.14
    20 PP_1821 Glutathione S-transferase family protein -0.14

    Or look for positive cofitness