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  • Negative cofitness for PP_3003 from Pseudomonas putida KT2440

    3-dehydroquinate dehydratase 3, type II
    SEED: 3-dehydroquinate dehydratase II (EC 4.2.1.10)
    KEGG: 3-dehydroquinate dehydratase II

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4799 putative Muramoyltetrapeptide carboxypeptidase -0.22
    2 PP_1468 Tyrosine recombinase XerD -0.20
    3 PP_1907 Hydrolase, haloacid dehalogenase-like family -0.19
    4 PP_3248 Dyp-type peroxidase family protein -0.19
    5 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex -0.19
    6 PP_3531 conserved exported protein of unknown function -0.18
    7 PP_4004 DNA translocase FtsK -0.17
    8 PP_3073 3-hydroxybutyrate dehydrogenase -0.17
    9 PP_3640 Transcriptional regulator, AraC family -0.17
    10 PP_1084 putative peroxiredoxin -0.17
    11 PP_3018 conserved protein of unknown function -0.17
    12 PP_0856 conserved lipoprotein of unknown function -0.16
    13 PP_4880 exoribonuclease R -0.16
    14 PP_2435 cysteine desulfurase -0.16
    15 PP_1428 Sigma factor AlgU negative regulatory protein -0.16
    16 PP_3685 conserved protein of unknown function -0.16
    17 PP_3575 Outer membrane ferric siderophore receptor -0.15
    18 PP_0439 conserved protein of unknown function -0.15
    19 PP_5310 junction-specific ATP-dependent DNA helicase -0.15
    20 PP_4943 putative Glycosyl transferase -0.15

    Or look for positive cofitness