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  • Negative cofitness for PP_2982 from Pseudomonas putida KT2440

    putative cointegrate resolution protein T Tn4652
    SEED: Cointegrate resolution protein T

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1871 Protease HtpX -0.17
    2 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat -0.16
    3 PP_1036 membrane-bound lytic murein transglycosylase F -0.16
    4 PP_1798 Outer membrane efflux protein -0.16
    5 PP_1204 putative Lipoprotein -0.16
    6 PP_0822 tRNA 2-selenouridine synthase -0.16
    7 PP_5023 Amino acid ABC transporter, permease protein -0.15
    8 PP_4550 long-chain-fatty-acid/CoA ligase -0.15
    9 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase -0.15
    10 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) -0.15
    11 PP_5279 conserved protein of unknown function -0.15
    12 PP_0653 conserved protein of unknown function -0.15
    13 PP_1627 conserved protein of unknown function -0.14
    14 PP_1075 glycerol kinase -0.14
    15 PP_1821 Glutathione S-transferase family protein -0.14
    16 PP_4805 membrane-bound lytic murein transglycosylase B -0.14
    17 PP_2027 conserved exported protein of unknown function -0.14
    18 PP_1797 HlyD family secretion protein -0.14
    19 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.14
    20 PP_4219 non-ribosomal peptide synthetase -0.14

    Or look for positive cofitness