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  • Negative cofitness for PP_2908 from Pseudomonas putida KT2440

    DNA-binding transcriptional repressor
    SEED: CsiR, transcriptional repressor of CsiD

    Computing cofitness values with 995 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2543 gamma-aminobutyrate permease -0.33
    2 PP_5273 putative Oxidoreductase -0.20
    3 PP_5509 conserved exported protein of unknown function -0.19
    4 PP_3415 Transcriptional regulator, LacI family -0.19
    5 PP_4866 High-affinity branched-chain amino acid transport system permease protein BraD -0.19
    6 PP_4863 high-affinity branched-chain amino acid transporter, ATP-binding -0.19
    7 PP_2642 Transcriptional regulator, GntR family -0.19
    8 PP_4865 High-affinity branched-chain amino acid transport system permease protein BraE -0.19
    9 PP_4864 High-affinity branched-chain amino acid transport ATP-binding protein BraF -0.18
    10 PP_5136 ABC transporter, permease protein -0.18
    11 PP_4756 gamma-aminobutyrate permease -0.17
    12 PP_1445 carbohydrate-selective porin -0.17
    13 PP_0015 putative transposon protein -0.17
    14 PP_0016 conserved hypothetical protein -0.17
    15 PP_3694 conserved protein of unknown function -0.17
    16 PP_0021 conserved hypothetical protein -0.16
    17 PP_5279 conserved protein of unknown function -0.16
    18 PP_1627 conserved protein of unknown function -0.16
    19 PP_1798 Outer membrane efflux protein -0.16
    20 PP_1797 HlyD family secretion protein -0.16

    Or look for positive cofitness