• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_2791 from Pseudomonas putida KT2440

    4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data)
    Original annotation: Aminoglycoside phosphotransferase
    SEED: aminoglycoside phosphotransferase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0353 Exonuclease -0.20
    2 PP_2797 acetate permease -0.18
    3 PP_1236 putative Glycine cleavage system transcriptional repressor -0.14
    4 PP_0370 Acyl-CoA dehydrogenase family protein -0.13
    5 PP_0968 conserved protein of unknown function -0.13
    6 PP_1893 medium-long chain acyl-CoA dehydrogenase -0.13
    7 PP_4100 Transcriptional regulator, Cro/CI family -0.13
    8 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate -0.12
    9 PP_4975 Long-chain acyl-CoA thioester hydrolase family protein -0.12
    10 PP_1197 ribosomal protein S12 methylthiotransferase -0.12
    11 PP_4710 tRNA pseudouridine 55 synthase -0.12
    12 PP_3171 conserved protein of unknown function -0.12
    13 PP_5024 Amino acid ABC transporter, periplasmic amino acid-binding protein -0.12
    14 PP_1542 conserved protein of unknown function -0.12
    15 PP_0191 Transcriptional regulatory protein AlgQ -0.12
    16 PP_0900 PAP2 family protein -0.12
    17 PP_5191 conserved exported protein of unknown function -0.12
    18 PP_1234 putative permease -0.11
    19 PP_0859 putative ketoglutaramate omega-amidase -0.11
    20 PP_1533 putative Excisionase -0.11

    Or look for positive cofitness