Negative cofitness for PP_2790 from Pseudomonas putida KT2440

Sigma-54 dependent sensory box protein
SEED: Propionate catabolism operon regulatory protein PrpR

Computing cofitness values with 989 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	PP_2797		acetate permease	-0.27
2	PP_1236		putative Glycine cleavage system transcriptional repressor	-0.23
3	PP_0353		Exonuclease	-0.21
4	PP_0163		putative transcriptional regulator	-0.19
5	PP_2144		Transcriptional regulator, TetR family	-0.19
6	PP_2437		putative Acyl-CoA dehydrogenase	-0.18
7	PP_0191		Transcriptional regulatory protein AlgQ	-0.18
8	PP_0264		Sensor histidine kinase	-0.18
9	PP_4100		Transcriptional regulator, Cro/CI family	-0.17
10	PP_4944		Carbamoyltransferase	-0.15
11	PP_4734		DNA-binding transcriptional dual regulator, LldR-L-lactate	-0.15
12	PP_3821		UTP-glucose-1-phosphate uridylyltransferase	-0.15
13	PP_0742		conserved exported protein of unknown function	-0.15
14	PP_1761		diguanylate cyclase with phosphodiesterase domain	-0.14
15	PP_0674		ADP/ATP ratio sensor and inhibitor of translation	-0.14
16	PP_5200		proline aminopeptidase P II	-0.13
17	PP_1918		septation protein	-0.13
18	PP_0482		bacterioferritin	-0.13
19	PP_4684		conserved protein of unknown function with kinase-like domain	-0.13
20	PP_4975		Long-chain acyl-CoA thioester hydrolase family protein	-0.13

Or look for positive cofitness