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  • Negative cofitness for PP_2652 from Pseudomonas putida KT2440

    putative Hydratase/decarboxylase
    SEED: 2-keto-4-pentenoate hydratase (EC 4.2.1.80)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5137 ferric iron ABC transporter, ATP-binding protein -0.26
    2 PP_2025 Exonuclease SbcD -0.25
    3 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily -0.25
    4 PP_1824 Smr domain protein -0.24
    5 PP_2210 LysR family transcriptional regulator -0.24
    6 PP_2927 conserved protein of unknown function -0.23
    7 PP_1445 carbohydrate-selective porin -0.22
    8 PP_0534 putative Transcriptional regulator PfeR -0.22
    9 PP_1821 Glutathione S-transferase family protein -0.22
    10 PP_0086 conserved protein of unknown function -0.21
    11 PP_2641 Iron-sulfur cluster-binding protein -0.21
    12 PP_3581 conserved membrane protein of unknown function -0.20
    13 PP_5153 putative isomerase/hydrolase -0.20
    14 PP_0924 conserved protein of unknown function -0.20
    15 PP_0740 Transcriptional regulator, MerR family -0.20
    16 PP_4237 periplasmic protein disulfide isomerase -0.20
    17 PP_2127 Sensor histidine kinase -0.20
    18 PP_4973 conserved membrane protein of unknown function -0.20
    19 PP_2832 galactose-binding protein regulator -0.20
    20 PP_3256 Glycosyl transferase, group 2 family protein -0.20

    Or look for positive cofitness