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  • Negative cofitness for PP_2625 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Type VI secretion protein VasI
    KEGG: type VI secretion system protein VasI

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0137 glutamate/aspartate-proton DAACS transporter -0.17
    2 PP_4004 DNA translocase FtsK -0.16
    3 PP_2871 Class II aldolase/adducin domain protein -0.15
    4 PP_2689 putative Endoribonuclease -0.15
    5 PP_5568 conserved membrane protein of unknown function -0.15
    6 PP_2901 Acyl-homoserine lactone acylase -0.15
    7 PP_1067 Sensor histidine kinase -0.15
    8 PP_3103 conserved protein of unknown function -0.15
    9 PP_5745 paraquat-inducible protein A -0.15
    10 PP_0279 conserved protein of unknown function -0.15
    11 PP_1598 regulatory intramembrane protein RIP zinc protease -0.15
    12 PP_4944 Carbamoyltransferase -0.15
    13 PP_4583 putative Peptidase -0.14
    14 PP_1215 Crossover junction endodeoxyribonuclease RuvC -0.14
    15 PP_4118 putative Membrane protein -0.14
    16 PP_2567 Hydrolase, alpha/beta fold family -0.14
    17 PP_4114 conserved protein of unknown function -0.14
    18 PP_0143 conserved membrane protein of unknown function -0.13
    19 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase -0.13
    20 PP_1565 Phage portal protein, HK97 family -0.13

    Or look for positive cofitness