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  • Negative cofitness for PP_2554 from Pseudomonas putida KT2440

    putative 3-dehydroshikimate dehydratase
    SEED: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
    KEGG: 4-hydroxyphenylpyruvate dioxygenase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0160 putative ferrioxamine receptor -0.17
    2 PP_3512 conserved membrane protein of unknown function -0.15
    3 PP_3680 conserved protein of unknown function -0.14
    4 PP_5153 putative isomerase/hydrolase -0.14
    5 PP_5490 site-specific DNA recombinase -0.14
    6 PP_0157 transcriptional activator of gcdH, LysR family -0.13
    7 PP_3699 conserved protein of unknown function -0.13
    8 PP_5371 Rubredoxin/rubredoxin reductase -0.13
    9 PP_t29 tRNA-Ala -0.13
    10 PP_1938 conserved protein of unknown function -0.13
    11 PP_3702 conserved protein of unknown function -0.13
    12 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily -0.13
    13 PP_3681 putative Helicase -0.13
    14 PP_5598 conserved protein of unknown function -0.13
    15 PP_5392 conserved hypothetical protein containing WD40/YVTN repeat domain -0.13
    16 PP_1552 putative Phage replication protein -0.12
    17 PP_2980 conserved protein of unknown function -0.12
    18 PP_5429 protein of unknown function -0.12
    19 PP_1783 dTDP-glucose pyrophosphorylase -0.12
    20 PP_3856 conserved protein of unknown function -0.12

    Or look for positive cofitness