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  • Negative cofitness for PP_2518 from Pseudomonas putida KT2440

    gallate dioxygenase
    SEED: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
    KEGG: protocatechuate 4,5-dioxygenase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2996 conserved protein of unknown function -0.19
    2 PP_4242 conserved protein of unknown function with Rhs repeat-associated core domain -0.19
    3 PP_0731 phosphatidylcholine synthase -0.18
    4 PP_0314 conserved protein of unknown function -0.18
    5 PP_2750 putative Branched-chain amino acid ABC transporter, permease protein -0.18
    6 PP_5491 conserved protein of unknown function with SEC-C motif domain -0.17
    7 PP_4410 conserved protein of unknown function -0.17
    8 PP_2592 Ferric siderophore ABC transporter, ATP-binding protein -0.17
    9 PP_2248 putative transporter -0.16
    10 PP_1479 HicB protein -0.16
    11 PP_1303 Sulfate adenylyltransferase subunit 2 -0.16
    12 PP_5242 Sensor histidine kinase/GAF domain protein -0.16
    13 PP_3406 Acetyltransferase, GNAT family -0.16
    14 PP_4246 Periplasmic binding protein -0.16
    15 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) -0.16
    16 PP_4085 putative RHS family protein -0.15
    17 PP_0570 lipoprotein of unknown function -0.15
    18 PP_0049 conserved protein of unknown function -0.15
    19 PP_5370 Oxidoreductase-related protein -0.15
    20 PP_2388 Transporter, LysE family -0.15

    Or look for positive cofitness