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  • Negative cofitness for PP_2455 from Pseudomonas putida KT2440

    ribose ABC transporter - ATP-binding subunit
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2714 Sensor histidine kinase -0.30
    2 PP_2348 Sensor histidine kinase -0.26
    3 PP_2433 conserved protein of unknown function -0.26
    4 PP_2326 Universal stress protein -0.25
    5 PP_2645 magnesium transporter, ATP-dependent -0.24
    6 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator -0.23
    7 PP_2646 conserved protein of unknown function -0.23
    8 PP_2376 Esterified fatty acid cis/trans isomerase -0.21
    9 PP_3376 putative phosphonate dehydrogenase -0.20
    10 PP_1253 Transcriptional regulator, ArsR family -0.20
    11 PP_5081 Type IV pili biogenesis protein -0.20
    12 PP_1328 Protein MraZ -0.20
    13 PP_0506 putative ABC efflux transporter, permease protein -0.20
    14 PP_0248 Probable alpha-L-glutamate ligase -0.20
    15 PP_0435 Peptidase, M23/M37 family -0.19
    16 PP_1109 Transcriptional regulator, GntR family -0.19
    17 PP_2132 Universal stress protein -0.19
    18 PP_2017 aminopeptidase N -0.19
    19 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.19
    20 PP_1797 HlyD family secretion protein -0.19

    Or look for positive cofitness