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  • Negative cofitness for PP_2390 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3831 conserved protein of unknown function -0.28
    2 PP_4058 1,4-alpha-glucan branching enzyme -0.26
    3 PP_2211 Transcriptional regulator, AraC family -0.24
    4 PP_3778 Pyrroline-5-carboxylate reductase -0.24
    5 PP_1113 Pyridoxal-phosphate dependent enzyme family protein -0.24
    6 PP_1598 regulatory intramembrane protein RIP zinc protease -0.24
    7 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 -0.23
    8 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase -0.23
    9 PP_2337 aconitate isomerase -0.23
    10 PP_1445 carbohydrate-selective porin -0.21
    11 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) -0.21
    12 PP_0369 putative diguanylate cyclase -0.21
    13 PP_3761 Sensor histidine kinase/response regulator -0.21
    14 PP_2214 3-hydroxyacyl-CoA dehydrogenase type-2 -0.21
    15 PP_2210 LysR family transcriptional regulator -0.20
    16 PP_4403 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex -0.20
    17 PP_0995 conserved membrane protein of unknown function -0.20
    18 PP_t11 tRNA-Lys -0.20
    19 PP_1187 sensor protein -0.20
    20 PP_2336 aconitate hydratase 1 -0.20

    Or look for positive cofitness