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  • Negative cofitness for PP_2327 from Pseudomonas putida KT2440

    transcriptional dual regulator / CysB-O-acetyl-L-serine
    SEED: Cys regulon transcriptional activator CysB
    KEGG: LysR family transcriptional regulator, cys regulon transcriptional activator

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1113 Pyridoxal-phosphate dependent enzyme family protein -0.35
    2 PP_0850 Dual-specificity RNA methyltransferase RlmN -0.34
    3 PP_1909 putative septum formation protein -0.32
    4 PP_2379 putative cytochrome oxidase biogenesis protein -0.32
    5 PP_5053 Protein-export protein SecB -0.30
    6 PP_2363 conserved protein of unknown function -0.30
    7 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.29
    8 PP_0872 Peptide chain release factor 3 -0.28
    9 PP_2387 conserved protein of unknown function -0.28
    10 PP_5283 periplasmic dipeptide transport protein -0.28
    11 PP_0573 conserved protein of unknown function -0.28
    12 PP_2332 conserved exported protein of unknown function -0.28
    13 PP_4944 Carbamoyltransferase -0.27
    14 PP_1646 putative Thioredoxin -0.27
    15 PP_1500 putative Lipoprotein -0.27
    16 PP_5337 LysR family transcriptional regulator -0.27
    17 PP_0137 glutamate/aspartate-proton DAACS transporter -0.27
    18 PP_3415 Transcriptional regulator, LacI family -0.26
    19 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 -0.26
    20 PP_1279 Probable alginate O-acetylase AlgJ -0.26

    Or look for positive cofitness