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  • Negative cofitness for PP_2302 from Pseudomonas putida KT2440

    DNA-binding, ATP-dependent protease
    SEED: ATP-dependent protease La (EC 3.4.21.53) Type I
    KEGG: ATP-dependent Lon protease

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1798 Outer membrane efflux protein -0.38
    2 PP_1627 conserved protein of unknown function -0.36
    3 PP_0540 conserved inner membrane protein -0.36
    4 PP_1871 Protease HtpX -0.34
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B -0.34
    6 PP_1918 septation protein -0.34
    7 PP_5283 periplasmic dipeptide transport protein -0.33
    8 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent -0.33
    9 PP_1797 HlyD family secretion protein -0.32
    10 PP_2148 transcription-repair coupling factor -0.32
    11 PP_1663 conserved exported protein of unknown function -0.32
    12 PP_3627 conserved protein of unknown function -0.32
    13 PP_1791 putative Aldolase/synthase -0.31
    14 PP_1774 conserved exported protein of unknown function -0.31
    15 PP_4171 conserved exported protein of unknown function -0.29
    16 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase -0.29
    17 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.29
    18 PP_1803 UDP-sugar epimerase -0.28
    19 PP_3769 conserved exported protein of unknown function -0.28
    20 PP_5284 UPF0758 protein PP_5284 -0.28

    Or look for positive cofitness