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  • Negative cofitness for PP_2266 from Pseudomonas putida KT2440

    DNA-directed RNA polymerase, bacteriophage and mitochondrial type
    SEED: DNA-directed RNA polymerase (EC 2.7.7.6)
    KEGG: DNA-directed RNA polymerase, mitochondrial

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0099 conserved protein of unknown function -0.24
    2 PP_1906 ribosomal large subunit pseudouridine synthase C -0.18
    3 PP_1860 Organic hydroperoxide resistance transcriptional regulator -0.17
    4 PP_1268 putative HtrA suppressor protein sohA -0.17
    5 PP_2641 Iron-sulfur cluster-binding protein -0.16
    6 PP_2402 putative Sensor histidine kinase -0.16
    7 PP_2386 conserved protein of unknown function -0.16
    8 PP_2776 Homocysteine S-methyltransferase family protein -0.15
    9 PP_2338 2-methylcitrate dehydratase -0.15
    10 PP_2771 Sigma-54 dependent transcriptional regulator -0.15
    11 PP_0707 putative membrane protein -0.15
    12 PP_2428 Probable sugar efflux transporter -0.15
    13 PP_2593 Ferric siderophore ABC transporter, permease protein -0.15
    14 PP_0236 NAD(P)H-dependent FMN reductase subunit -0.15
    15 PP_0086 conserved protein of unknown function -0.14
    16 PP_0628 conserved protein of unknown function -0.14
    17 PP_0822 tRNA 2-selenouridine synthase -0.14
    18 PP_5597 conserved protein of unknown function -0.14
    19 PP_1748 conserved protein of unknown function -0.14
    20 PP_4980 ATP-dependent RNA helicase -0.14

    Or look for positive cofitness