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  • Negative cofitness for PP_2259 from Pseudomonas putida KT2440

    putative sigma-54 dependent transcriptional regulator
    SEED: sigma-54 dependent transcriptional regulator

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_2473 conserved protein of unknown function -0.18
    2 PP_2707 putative Exodeoxyribonuclease III -0.17
    3 PP_4209 ABC export system, membrane fusion protein -0.16
    4 PP_2652 putative Hydratase/decarboxylase -0.16
    5 PP_1720 Alcohol dehydrogenase, zinc-containing -0.16
    6 PP_3845 putrescine-binding periplasmic protein -0.16
    7 PP_1532 putative Phage integrase -0.16
    8 PP_1577 Phage tail tape meausure protein, lambda family -0.16
    9 PP_3302 RND efflux transporter -0.16
    10 PP_4872 putative enzyme of unknown function -0.16
    11 PP_4942 conserved protein of unknown function -0.15
    12 PP_2220 C4-type zinc finger protein, DksA/TraR family -0.15
    13 PP_2979 conserved protein of unknown function -0.14
    14 PP_4941 conserved exported protein of unknown function -0.14
    15 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein -0.14
    16 PP_3152 putative DNA-binding transcriptional regulator, LysR-type -0.14
    17 PP_5614 protein of unknown function -0.14
    18 PP_3415 Transcriptional regulator, LacI family -0.14
    19 PP_4462 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase -0.14
    20 PP_0805 Outer membrane efflux protein -0.14

    Or look for positive cofitness