• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PP_2258 from Pseudomonas putida KT2440

    Sensory box protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_5320 two-component system DNA-binding transcriptional dual response regulator PhoB -0.25
    2 PP_5321 two-component system sensory histidine kinase -0.20
    3 PP_5667 putative microcin B17-like-processing protein, McbC family -0.17
    4 PP_1099 Cold shock protein CapB -0.17
    5 PP_5026 Glucans biosynthesis protein G -0.17
    6 PP_5025 Glucans biosynthesis glucosyltransferase H -0.17
    7 PP_4316 D-isomer specific 2-hydroxyacid dehydrogenase family protein -0.17
    8 PP_2778 3-oxoacyl-(Acyl-carrier-protein) synthase II -0.17
    9 PP_5733 putative metal-binding protein -0.17
    10 PP_0506 putative ABC efflux transporter, permease protein -0.17
    11 PP_5206 putative translation-related protein -0.16
    12 PP_0395 putative type IV piliation protein -0.16
    13 PP_4588 putative oxidoreductase (nitroreductase family) -0.16
    14 PP_4077 conserved protein of unknown function -0.16
    15 PP_0396 conserved protein of unknown function -0.16
    16 PP_0572 peptidoglycan glycosyltransferase -0.16
    17 PP_0757 conserved protein of unknown function -0.16
    18 PP_2153 conserved protein of unknown function -0.15
    19 PP_3182 GGDEF domain protein -0.15
    20 PP_2349 nitrite transporter, HPP family (from data) -0.15

    Or look for positive cofitness