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  • Negative cofitness for PP_2216 from Pseudomonas putida KT2440

    short-chain acyl-CoA dehydrogenase
    SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
    KEGG:

    Computing cofitness values with 995 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4641 putative transporter -0.28
    2 PP_4640 conserved protein of unknown function -0.26
    3 PP_2389 conserved protein of unknown function -0.24
    4 PP_3415 Transcriptional regulator, LacI family -0.22
    5 PP_1059 Uncharacterized amino acid permease YtnA -0.20
    6 PP_4776 AsnC family transcriptional regulator -0.20
    7 PP_4756 gamma-aminobutyrate permease -0.18
    8 PP_2390 Transcriptional regulator, LysR family -0.17
    9 PP_4697 poly(A) polymerase -0.17
    10 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase -0.16
    11 PP_4052 4-alpha-glucanotransferase -0.16
    12 PP_2248 putative transporter -0.16
    13 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease -0.16
    14 PP_1236 putative Glycine cleavage system transcriptional repressor -0.15
    15 PP_2163 VacJ lipoprotein -0.14
    16 PP_4006 Putative arginyl-tRNA--protein transferase -0.14
    17 PP_2388 Transporter, LysE family -0.14
    18 PP_4340 response regulator for chemotactic signal transduction -0.14
    19 PP_2387 conserved protein of unknown function -0.14
    20 PP_1444 quinoprotein glucose dehydrogenase -0.13

    Or look for positive cofitness