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  • Negative cofitness for PP_2214 from Pseudomonas putida KT2440

    3-hydroxyacyl-CoA dehydrogenase type-2
    SEED: Probable acyl-CoA dehydrogenase (EC 1.3.99.3)

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4246 Periplasmic binding protein -0.26
    2 PP_2389 conserved protein of unknown function -0.24
    3 PP_0016 conserved hypothetical protein -0.23
    4 PP_1444 quinoprotein glucose dehydrogenase -0.21
    5 PP_2390 Transcriptional regulator, LysR family -0.21
    6 PP_1650 Sensor protein GacS -0.20
    7 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.20
    8 PP_4099 two-componenent system BarA/UvrY - regulatory subunit -0.20
    9 PP_4641 putative transporter -0.19
    10 PP_2248 putative transporter -0.19
    11 PP_4971 putative Outer membrane-bound lytic murein transglycolase A -0.19
    12 PP_1289 conserved protein of unknown function, DUF328 family -0.19
    13 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.19
    14 PP_4486 lysine / arginine / ornithine ABC transporter - periplasmic binding protein -0.18
    15 PP_1109 Transcriptional regulator, GntR family -0.18
    16 PP_1875 Sensor histidine kinase/response regulator -0.18
    17 PP_5037 lipocalin family lipoprotein -0.18
    18 PP_5086 putative nuclease (SNase domain protein) -0.18
    19 PP_0033 putative undecaprenyl-glycosyl transferase -0.18
    20 PP_4178 Dienelactone hydrolase family protein -0.18

    Or look for positive cofitness