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  • Negative cofitness for PP_2210 from Pseudomonas putida KT2440

    LysR family transcriptional regulator
    SEED: Phosphonate uptake and metabolism regulator, LysR-family

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.42
    2 PP_3790 diaminopimelate epimerase -0.40
    3 PP_2714 Sensor histidine kinase -0.39
    4 PP_0506 putative ABC efflux transporter, permease protein -0.38
    5 PP_3788 putative Non-ribosomal peptide synthetase -0.38
    6 PP_3376 putative phosphonate dehydrogenase -0.37
    7 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase -0.33
    8 PP_3786 aminotransferase -0.32
    9 PP_3787 conserved protein of unknown function -0.31
    10 PP_1111 putative Synthetase -0.30
    11 PP_1109 Transcriptional regulator, GntR family -0.29
    12 PP_1110 serine acetyltransferase -0.29
    13 PP_4922 Phosphomethylpyrimidine synthase -0.29
    14 PP_3855 conserved protein of unknown function -0.28
    15 PP_1301 quality control serine endoprotease DegS -0.27
    16 PP_2513 4-oxalomesaconate tautomerase -0.27
    17 PP_2537 conserved protein of unknown function -0.26
    18 PP_4421 putative aminotransferase -0.26
    19 PP_5384 copper sensor protein -0.25
    20 PP_3244 Magnesium transporter, MgtC family -0.25

    Or look for positive cofitness