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  • Negative cofitness for PP_2192 from Pseudomonas putida KT2440

    putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein
    SEED: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0083 tryptophan synthase beta chain -0.23
    2 PP_5227 diaminopimelate decarboxylase -0.21
    3 PP_1986 3-isopropylmalate dehydratase small subunit -0.20
    4 PP_4696 Nitrogen regulation protein NR(I) -0.20
    5 PP_0082 tryptophan synthase alpha chain -0.20
    6 PP_1656 ATP:GTP 3'-pyrophosphotransferase -0.20
    7 PP_2375 cobalamin-dependent methionine synthase -0.19
    8 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.19
    9 PP_5098 methionine biosynthesis protein MetW -0.18
    10 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) -0.18
    11 PP_1022 glucose 6-phosphate-1-dehydrogenase -0.18
    12 PP_5217 Polyphosphate kinase -0.18
    13 PP_2328 Phosphoadenosine phosphosulfate reductase -0.17
    14 PP_2001 O-succinylhomoserine sulfhydrylase -0.17
    15 PP_0293 Imidazole glycerol phosphate synthase subunit HisF -0.17
    16 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase -0.17
    17 PP_3999 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase -0.17
    18 PP_2168 Transaldolase -0.17
    19 PP_4228 conserved protein of unknown function -0.17
    20 PP_5097 homoserine O-acetyltransferase -0.17

    Or look for positive cofitness