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  • Negative cofitness for PP_2173 from Pseudomonas putida KT2440

    Transcriptional regulator, AraC family
    SEED: transcriptional regulator, AraC family
    KEGG: AraC family transcriptional regulator

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_4176 putative 5-oxo-L-prolinase -0.21
    2 PP_1036 membrane-bound lytic murein transglycosylase F -0.21
    3 PP_2694 Aldehyde dehydrogenase family protein -0.21
    4 PP_2210 LysR family transcriptional regulator -0.20
    5 PP_2933 GSH-dependent disulfide bond oxidoreductase -0.20
    6 PP_1113 Pyridoxal-phosphate dependent enzyme family protein -0.20
    7 PP_5279 conserved protein of unknown function -0.19
    8 PP_4041 putative glycoside hydrolase -0.19
    9 PP_3305 Membrane protein, TerC family -0.19
    10 PP_1721 putative phosphoserine phosphatase -0.19
    11 PP_2757 putative Sugar-binding protein -0.19
    12 PP_0830 Acetyltransferase, GNAT family -0.19
    13 PP_3831 conserved protein of unknown function -0.18
    14 PP_3775 putative sarcosine oxidase -0.18
    15 PP_1281 Alginate lyase -0.18
    16 PP_5519 conserved protein of unknown function of phage origin -0.18
    17 PP_0994 putative RNA polymerase sigma factor -0.18
    18 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase -0.18
    19 PP_4171 conserved exported protein of unknown function -0.17
    20 PP_3259 Acyl-CoA dehydrogenase-related protein -0.17

    Or look for positive cofitness