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  • Negative cofitness for PP_2170 from Pseudomonas putida KT2440

    putative enzyme, chorismate mutase family protein
    SEED: Isochorismate pyruvate-lyase (EC 4.-.-.-)
    KEGG: isochorismate pyruvate-lyase

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_0579 conserved protein of unknown function -0.18
    2 PP_5467 conserved exported protein of unknown function -0.17
    3 PP_1637 Transcriptional regulator, LysR family -0.17
    4 PP_0701 fosmidomycin efflux system -0.17
    5 PP_4288 ureidoglycolate lyase -0.17
    6 PP_5066 K(+)/H(+) antiporter NhaP2 -0.16
    7 PP_1394 putative Acetolactate synthase, large subunit -0.16
    8 PP_1534 conserved protein of unknown function -0.15
    9 PP_0725 conserved hypothetical TPR repeat protein -0.15
    10 PP_5058 Carboxy-terminal-processing protease -0.15
    11 PP_3260 DNA ligase D -0.15
    12 PP_2891 Acetyltransferase, GNAT family -0.15
    13 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -0.14
    14 PP_0572 peptidoglycan glycosyltransferase -0.14
    15 PP_0706 fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator -0.14
    16 PP_1552 putative Phage replication protein -0.14
    17 PP_5113 predicted Zn-dependent peptidases -0.14
    18 PP_1396 conserved protein of unknown function -0.14
    19 PP_3466 putative ABC efflux transporter, permease/ATP-binding protein -0.14
    20 PP_1499 conserved protein of unknown function -0.14

    Or look for positive cofitness